I've been working with novopaired for a while and it works very efficiently for what I need, but for some reason about 5% of my files 10,000 reads per file cause the program to display the following error and then must be forced-quit.
I have tried this on multiple servers and the same files always give the same errors
]$ ./novopaired -d human_index -f seqfile_5.fa seqfile_3.fa > novo_output.tab
Obtained 6 stack frames.
Thank you for your help,