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Re: novoalignMPI with SGE

Posted by zayed on Fri 18 of May, 2012 00:02 MYT

Hi Lebowski

could you try the following attached file.

You should make a parallel environment using qconf and assign the number of cores you want to use e.g.

$ -V -cwd -pe parenv 44

mpiexec -n 44 /PATH/novoalignMPI -c 1 ...

I have attached an updated script for you to try

mpich2_mpi.sh (691 b)

Reads: 190

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