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Products
novoAlign
novoWorx
novoClinic
novoAlignCS
novoSort
novoSplice
Services
Bioinformatics Consultancy
Pipeline and Software Development Services
Bioinformatics Contract Research Services
Support
Download
FAQ
User Forum
News
About Us
Clients
Opportunities
Investor
Contact Us
Try/Buy
Documentation
NovoAlign
NovoAlign NGS Quick Start Tutorial
Basic Short Read Mapping
Exome Sequencing Analysis
SNP and MicroIndel Detection
MicroRNA Mapping
NovoAlign SAM Format Validation
Mapping Reads with Cluster-Aware NovoAlign MPI
Extracting Unmapped Reads from a BAM File Produced by NovoAlign
Novoalign Reference Manual
Novoalign User Guide
Getting Started
Adapter Stripping
PCR Adaptor Stripping
Paired End Short Fragment Detection and Adapter Stripping
3 Prime Adapter Stripping
MicroRNA
RNASeq Analysis: mRNA and the Spliceosome
Bisulphite Treated Reads
NovoMethyl – Analyzing Methylation Status
Regard the Bisulphite Treatment
Performance Notes
Long Single Reads
Short vs Long Reads
HPCs
Quality Calibration
Bisulphite Treated DNA
The phiX Lane
Streptococcus suis Quality Calibration
NovoAlign Command Options
Reporting Multiple Alignments per Read
Paired Read Modes
NovoAlignMPI
NovoAlignCS
NovoBarcode
Demultiplexing Barcoded/Indexed Reads with Novobarcode
NovoIndex
NovoUtil
NovoUtil BGZF
NovoSort
Novo2maq
User Contribution
Novopile
RNA_PEref – A set of perl tools to create a reference sequence set for paired end mapping of short transcriptome sequencing reads.
Useq Applications
Other Sequencing Platforms
Helioscope Reads
Polonator Reads
454 Paired End Reads
ION Torrent PGM
Benchmarking ION Torrent PGM Aligners
Novoalign Reference Manual
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Novoalign Reference Manual, Version 3.00
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